intervaldb now on github

intervaldb has moved from blipkit svn to githib.

intervaldb is an SWI-Prolog wrapper for the nested containment list (NCList) C library distributed as part of PyGR. Query time is O(n+logN) where N is the size of the database and n is the size of the result set. It is primarily intended for indexing genomic data, but can be used for any kind of intervals, e.g. temporal data

See: http://bioinformatics.oxfordjournals.org/cgi/reprint/btl647v1

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